diff --git a/Source/Core/DolphinWX/Src/ConfigMain.cpp b/Source/Core/DolphinWX/Src/ConfigMain.cpp
index 60331b772a..9b90426f53 100644
--- a/Source/Core/DolphinWX/Src/ConfigMain.cpp
+++ b/Source/Core/DolphinWX/Src/ConfigMain.cpp
@@ -675,9 +675,11 @@ void CConfigMain::CoreSettingsChanged(wxCommandEvent& event)
 		break;
 	case ID_RADIOJIT:
 		SConfig::GetInstance().m_LocalCoreStartupParameter.bUseJIT = true;
+		if (main_frame->g_pCodeWindow) main_frame->g_pCodeWindow->GetMenuBar()->Check(IDM_INTERPRETER, false);
 		break;
 	case ID_RADIOINT:
 		SConfig::GetInstance().m_LocalCoreStartupParameter.bUseJIT = false;
+		if (main_frame->g_pCodeWindow) main_frame->g_pCodeWindow->GetMenuBar()->Check(IDM_INTERPRETER, true);
 		break;
 	case ID_CPUTHREAD:
 		SConfig::GetInstance().m_LocalCoreStartupParameter.bCPUThread = CPUThread->IsChecked();
diff --git a/Source/Core/DolphinWX/Src/Main.cpp b/Source/Core/DolphinWX/Src/Main.cpp
index 352dfaf739..66ceb92b5f 100644
--- a/Source/Core/DolphinWX/Src/Main.cpp
+++ b/Source/Core/DolphinWX/Src/Main.cpp
@@ -358,9 +358,6 @@ bool DolphinApp::OnInit()
 		// ============
 	#endif
 
-		// Load CONFIG_FILE settings
-		SConfig::GetInstance().LoadSettings();
-
 		if (selectVideoPlugin && videoPluginFilename != wxEmptyString)
 		{
 			SConfig::GetInstance().m_LocalCoreStartupParameter.m_strVideoPlugin = std::string(videoPluginFilename.mb_str());