diff --git a/Source/Core/VideoCommon/PixelShaderGen.cpp b/Source/Core/VideoCommon/PixelShaderGen.cpp
index e34251e110..da648b3ba6 100644
--- a/Source/Core/VideoCommon/PixelShaderGen.cpp
+++ b/Source/Core/VideoCommon/PixelShaderGen.cpp
@@ -344,8 +344,9 @@ void ClearUnusedPixelShaderUidBits(APIType ApiType, const ShaderHostConfig& host
   pixel_shader_uid_data* uid_data = uid->GetUidData<pixel_shader_uid_data>();
 
   // OpenGL and Vulkan convert implicitly normalized color outputs to their uint representation.
-  // Therefore, it is not necessary to use a uint output on these backends.
-  if (ApiType != APIType::D3D)
+  // Therefore, it is not necessary to use a uint output on these backends. We also disable the
+  // uint output when logic op is not supported (i.e. driver/device does not support D3D11.1).
+  if (ApiType != APIType::D3D || !host_config.backend_logic_op)
     uid_data->uint_output = 0;
 }
 
diff --git a/Source/Core/VideoCommon/UberShaderPixel.cpp b/Source/Core/VideoCommon/UberShaderPixel.cpp
index 8eff68f14b..9c9630886a 100644
--- a/Source/Core/VideoCommon/UberShaderPixel.cpp
+++ b/Source/Core/VideoCommon/UberShaderPixel.cpp
@@ -35,8 +35,9 @@ void ClearUnusedPixelShaderUidBits(APIType ApiType, const ShaderHostConfig& host
   pixel_ubershader_uid_data* uid_data = uid->GetUidData<pixel_ubershader_uid_data>();
 
   // OpenGL and Vulkan convert implicitly normalized color outputs to their uint representation.
-  // Therefore, it is not necessary to use a uint output on these backends.
-  if (ApiType != APIType::D3D)
+  // Therefore, it is not necessary to use a uint output on these backends. We also disable the
+  // uint output when logic op is not supported (i.e. driver/device does not support D3D11.1).
+  if (ApiType != APIType::D3D || !host_config.backend_logic_op)
     uid_data->uint_output = 0;
 }