diff --git a/Source/Core/Core/Boot/Boot.cpp b/Source/Core/Core/Boot/Boot.cpp
index b4d96afeaf..daf9472763 100644
--- a/Source/Core/Core/Boot/Boot.cpp
+++ b/Source/Core/Core/Boot/Boot.cpp
@@ -250,23 +250,23 @@ bool CBoot::Load_BS2(const std::string& boot_rom_filename)
   // to work around this.
   Memory::CopyToEmu(0x01200000, data.data() + 0x100, 0x700);
   Memory::CopyToEmu(0x01300000, data.data() + 0x820, 0x1AFE00);
+
   PowerPC::ppcState.gpr[3] = 0xfff0001f;
   PowerPC::ppcState.gpr[4] = 0x00002030;
   PowerPC::ppcState.gpr[5] = 0x0000009c;
-  PowerPC::ppcState.msr = 0x00002030;
+
+  UReg_MSR& m_MSR = ((UReg_MSR&)PowerPC::ppcState.msr);
+  m_MSR.FP = 1;
+  m_MSR.DR = 1;
+  m_MSR.IR = 1;
+
   PowerPC::ppcState.spr[SPR_HID0] = 0x0011c464;
-  PowerPC::ppcState.spr[SPR_IBAT0U] = 0x80001fff;
-  PowerPC::ppcState.spr[SPR_IBAT0L] = 0x00000002;
   PowerPC::ppcState.spr[SPR_IBAT3U] = 0xfff0001f;
   PowerPC::ppcState.spr[SPR_IBAT3L] = 0xfff00001;
-  PowerPC::ppcState.spr[SPR_DBAT0U] = 0x80001fff;
-  PowerPC::ppcState.spr[SPR_DBAT0L] = 0x00000002;
-  PowerPC::ppcState.spr[SPR_DBAT1U] = 0xc0001fff;
-  PowerPC::ppcState.spr[SPR_DBAT1L] = 0x0000002a;
   PowerPC::ppcState.spr[SPR_DBAT3U] = 0xfff0001f;
   PowerPC::ppcState.spr[SPR_DBAT3L] = 0xfff00001;
-  PowerPC::DBATUpdated();
-  PowerPC::IBATUpdated();
+  SetupBAT(/*is_wii*/ false);
+
   PC = 0x81200150;
   return true;
 }
@@ -359,6 +359,7 @@ bool CBoot::BootUp()
     if (dolWii)
     {
       HID4.SBE = 1;
+      SetupMSR();
       SetupBAT(dolWii);
 
       // Because there is no TMD to get the requested system (IOS) version from,
diff --git a/Source/Core/Core/Boot/Boot.h b/Source/Core/Core/Boot/Boot.h
index 1b90cf3457..c383dc2962 100644
--- a/Source/Core/Core/Boot/Boot.h
+++ b/Source/Core/Core/Boot/Boot.h
@@ -55,6 +55,7 @@ private:
   static bool Boot_ELF(const std::string& filename);
   static bool Boot_WiiWAD(const std::string& filename);
 
+  static void SetupMSR();
   static void SetupBAT(bool is_wii);
   static bool RunApploader(bool is_wii, const DiscIO::IVolume& volume);
   static bool EmulatedBS2_GC(const DiscIO::IVolume* volume, bool skip_app_loader = false);
diff --git a/Source/Core/Core/Boot/Boot_BS2Emu.cpp b/Source/Core/Core/Boot/Boot_BS2Emu.cpp
index c8288c4d44..8d0fff6f1c 100644
--- a/Source/Core/Core/Boot/Boot_BS2Emu.cpp
+++ b/Source/Core/Core/Boot/Boot_BS2Emu.cpp
@@ -51,13 +51,17 @@ void CBoot::RunFunction(u32 address)
     PowerPC::SingleStep();
 }
 
-void CBoot::SetupBAT(bool is_wii)
+void CBoot::SetupMSR()
 {
   UReg_MSR& m_MSR = ((UReg_MSR&)PowerPC::ppcState.msr);
   m_MSR.FP = 1;
   m_MSR.DR = 1;
   m_MSR.IR = 1;
   m_MSR.EE = 1;
+}
+
+void CBoot::SetupBAT(bool is_wii)
+{
   PowerPC::ppcState.spr[SPR_IBAT0U] = 0x80001fff;
   PowerPC::ppcState.spr[SPR_IBAT0L] = 0x00000002;
   PowerPC::ppcState.spr[SPR_DBAT0U] = 0x80001fff;
@@ -158,6 +162,7 @@ bool CBoot::EmulatedBS2_GC(const DiscIO::IVolume* volume, bool skip_app_loader)
 {
   INFO_LOG(BOOT, "Faking GC BS2...");
 
+  SetupMSR();
   SetupBAT(/*is_wii*/ false);
 
   // Write necessary values
@@ -350,6 +355,7 @@ bool CBoot::EmulatedBS2_Wii(const DiscIO::IVolume* volume)
   // after this check during booting.
   DVDRead(*volume, 0, 0x3180, 4, partition);
 
+  SetupMSR();
   SetupBAT(/*is_wii*/ true);
 
   Memory::Write_U32(0x4c000064, 0x00000300);  // Write default DSI Handler:   rfi
diff --git a/Source/Core/Core/Boot/Boot_ELF.cpp b/Source/Core/Core/Boot/Boot_ELF.cpp
index 9130fafdfc..1cef0937ba 100644
--- a/Source/Core/Core/Boot/Boot_ELF.cpp
+++ b/Source/Core/Core/Boot/Boot_ELF.cpp
@@ -70,6 +70,7 @@ bool CBoot::Boot_ELF(const std::string& filename)
   const bool is_wii = IsElfWii(filename);
   if (is_wii)
     HID4.SBE = 1;
+  SetupMSR();
   SetupBAT(is_wii);
 
   if (!reader.LoadSymbols())